ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116492 Ubp1-203 ENSMUSG00000009741 10090 + 9:113931564-113976817 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166ENSMUST00000116492
Transcript ID C166
ENSMUST00000116492 13.024±3.12

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000138416 tfcp2-001 protein_coding Danio_rerio 0 486
ENSDART00000040480 tfcp2l1-002 nonsense_mediated_decay Danio_rerio 0 211
ENSDART00000146663 tfcp2l1-001 protein_coding Danio_rerio 0 211
ENST00000283628 UBP1-003 protein_coding Homo_sapiens 0 1177
ENST00000283629 UBP1-001 protein_coding Homo_sapiens 0 1177
ENST00000411650 UBP1-008 nonsense_mediated_decay Homo_sapiens 0 972
ENST00000447368 UBP1-002 protein_coding Homo_sapiens 0 2340
ENST00000456378 UBP1-007 protein_coding Homo_sapiens 0 555
ENST00000464787 UBP1-011 retained_intron Homo_sapiens 0 396
ENST00000466441 UBP1-005 retained_intron Homo_sapiens 0 673
ENST00000467613 UBP1-015 processed_transcript Homo_sapiens 0 488
ENST00000481761 UBP1-009 processed_transcript Homo_sapiens 0 604
ENST00000486388 UBP1-010 processed_transcript Homo_sapiens 0 510
ENST00000490112 UBP1-014 retained_intron Homo_sapiens 0 279
ENST00000492136 UBP1-004 retained_intron Homo_sapiens 0 316

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