ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117060 Gm11841-001 ENSMUSG00000081593 10090 + 4:12125290-12127252 processed_pseudogene

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000117060
Transcript ID C166 Tie2+ EC mES
ENSMUST00000117060 0.027±0.02 0.035±0.01 0.013±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000148392 pabpc1a-002 protein_coding Danio_rerio 0 628
ENSDART00000024729 pabpc1a-001 protein_coding Danio_rerio 0 628
ENSDART00000032474 pabpc1b-001 protein_coding Danio_rerio 0 610
ENSDART00000149449 pabpc1a-006 processed_transcript Danio_rerio 0 307
ENSDART00000149603 pabpc1a-004 processed_transcript Danio_rerio 0 259
ENSDART00000151056 pabpc1b-004 nonsense_mediated_decay Danio_rerio 0 220
ENSDART00000143087 pabpc1b-002 protein_coding Danio_rerio 0 219
ENSDART00000082327 pabpc4-001 protein_coding Danio_rerio 2e-37 161
ENSDART00000149264 pabpc1a-003 processed_transcript Danio_rerio 3e-30 137
ENST00000372856 PABPC4-004 protein_coding Homo_sapiens 0 1845
ENST00000372857 PABPC4-001 protein_coding Homo_sapiens 0 1773
ENST00000372858 PABPC4-002 protein_coding Homo_sapiens 0 2342
ENST00000372862 PABPC4-003 protein_coding Homo_sapiens 0 1773
ENST00000421687 PABPC4-017 protein_coding Homo_sapiens 0 1622
ENST00000437136 PABPC4-013 protein_coding Homo_sapiens 0 560
ENST00000461578 PABPC4-014 retained_intron Homo_sapiens 3e-36 154
ENST00000468476 PABPC4-006 retained_intron Homo_sapiens 6e-35 154
ENST00000470443 PABPC4-007 nonsense_mediated_decay Homo_sapiens 0 911
ENST00000474378 PABPC4-008 protein_coding Homo_sapiens 0 597
ENST00000477556 PABPC4-009 retained_intron Homo_sapiens 0 289
ENST00000483770 PABPC4-016 retained_intron Homo_sapiens 0 377
ENST00000484555 PABPC4-015 retained_intron Homo_sapiens 1.99993e-41 172
ENST00000492468 PABPC4-005 retained_intron Homo_sapiens 4e-35 154
ENST00000492519 PABPC4-010 retained_intron Homo_sapiens 0 326
ENST00000513632 PABPC4-020 retained_intron Homo_sapiens 0 237
ENST00000525045 PABPC4-023 retained_intron Homo_sapiens 0 350
ENST00000525669 PABPC4-022 retained_intron Homo_sapiens 0 496
ENST00000525751 PABPC4-019 retained_intron Homo_sapiens 0 457
ENST00000527718 PABPC4-021 protein_coding Homo_sapiens 0 686
ENST00000529216 PABPC4-025 processed_transcript Homo_sapiens 0 204
ENST00000555663 CTD-2643K12.1-001 processed_pseudogene Homo_sapiens 0 363

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