ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136278 P3h1-004 ENSMUSG00000028641 10090 + 4:119232954-119248369 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005783 ISO endoplasmic reticulum
GO:0005886 TAS plasma membrane
GO:0016049 IDA cell growth
GO:0019511 ISO peptidyl-proline hydroxylation
GO:0019797 ISO procollagen-proline 3-dioxygenase activity
GO:0030199 IMP collagen fibril organization
GO:0030278 IMP regulation of ossification
GO:0032963 ISO collagen metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236040 LEPRE1-002 protein_coding Homo_sapiens 0 1142
ENST00000296388 LEPRE1-001 protein_coding Homo_sapiens 0 1312
ENST00000372526 LEPRE1-012 protein_coding Homo_sapiens 0 355
ENST00000397054 LEPRE1-201 protein_coding Homo_sapiens 0 1240
ENST00000431412 LEPRE1-008 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000447502 LEPRE1-011 protein_coding Homo_sapiens 0 444
ENST00000460031 LEPRE1-009 retained_intron Homo_sapiens 0 1487
ENST00000462474 LEPRE1-007 processed_transcript Homo_sapiens 0 433
ENST00000463465 LEPRE1-010 retained_intron Homo_sapiens 0 575
ENST00000472802 LEPRE1-006 retained_intron Homo_sapiens 0 327
ENST00000481465 LEPRE1-013 retained_intron Homo_sapiens 0 564
ENST00000492956 LEPRE1-003 retained_intron Homo_sapiens 0 555
ENST00000495874 LEPRE1-004 retained_intron Homo_sapiens 0 2678

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