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ANGIOGENES: A knowledge database for angiogenesis
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Transcript Info |
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| Description: | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143379  |
Sqstm1-004 |
ENSMUSG00000015837 |
10090 | - |
11:50200611-50210765  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000407 | IDA | pre-autophagosomal structure |
| GO:0003712 | TAS | transcription cofactor activity |
| GO:0005515 | IPI | protein binding |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016235 | IDA | aggresome |
| GO:0042802 | IDA | identical protein binding |
| GO:2001141 | TAS | regulation of RNA biosynthetic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000360718
|
SQSTM1-002 | protein_coding | Homo_sapiens | 0 | 719 |
|
ENST00000389805
|
SQSTM1-001 | protein_coding | Homo_sapiens | 0 | 970 |
|
ENST00000422245
|
SQSTM1-003 | protein_coding | Homo_sapiens | 0 | 523 |
|
ENST00000453046
|
SQSTM1-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 254 |
|
ENST00000466342
|
SQSTM1-007 | retained_intron | Homo_sapiens | 0 | 584 |
|
ENST00000485412
|
SQSTM1-006 | retained_intron | Homo_sapiens | 0 | 388 |
|
ENST00000504627
|
SQSTM1-017 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000508284
|
SQSTM1-016 | nonsense_mediated_decay | Homo_sapiens | 0 | 255 |
|
ENST00000510187
|
SQSTM1-013 | protein_coding | Homo_sapiens | 0 | 1125 |
|
ENST00000514093
|
SQSTM1-015 | protein_coding | Homo_sapiens | 0 | 614 |
|
ENST00000522663
|
C5orf45-004 | nonsense_mediated_decay | Homo_sapiens | 1e-35 | 156 |
