ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167994 Prdm9-201 ENSMUSG00000051977 10090 - 17:15543079-15563323 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000167994
Transcript ID C166 Tie2+ EC mES
ENSMUST00000167994 0.385±0.21 0.564±0.18 0.170±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005654 IC nucleoplasm
GO:0005694 IEA chromosome
GO:0006311 IEA meiotic gene conversion
GO:0006351 IEA transcription, DNA-templated
GO:0007283 IMP spermatogenesis
GO:0010844 IDA recombination hotspot binding
GO:0010845 IMP positive regulation of reciprocal meiotic recombination
GO:0016571 IDA histone methylation
GO:0034968 IMP histone lysine methylation
GO:0042800 IDA histone methyltransferase activity (H3-K4 specific)
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0051321 IEA meiotic cell cycle
GO:0051568 IDA histone H3-K4 methylation
GO:0060903 IMP positive regulation of meiosis I

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296682 PRDM9-001 protein_coding Homo_sapiens 0 2146
ENST00000325921 PRDM7-001 retained_intron Homo_sapiens 0 231
ENST00000340911 ZNF169-001 protein_coding Homo_sapiens 0 403
ENST00000395395 ZNF169-003 protein_coding Homo_sapiens 0 403
ENST00000449207 PRDM7-002 protein_coding Homo_sapiens 0 935

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