ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171263 Gbp7-002 ENSMUSG00000040253 10090 + 3:142530342-142547050 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000171263
Transcript ID C166 Tie2+ EC mES
ENSMUST00000171263 0.229±0.05 3.348±0.00 0.090±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0020005 IDA symbiont-containing vacuole membrane
GO:0031410 IDA cytoplasmic vesicle
GO:0042832 IDA defense response to protozoan
GO:0044406 IDA adhesion of symbiont to host
GO:0050830 IDA defense response to Gram-positive bacterium
GO:0071346 IDA cellular response to interferon-gamma

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000235878 GBP3-002 nonsense_mediated_decay Homo_sapiens 0 217
ENST00000294671 GBP7-001 protein_coding Homo_sapiens 0 1136
ENST00000355754 GBP4-001 protein_coding Homo_sapiens 0 1201
ENST00000370456 GBP6-001 protein_coding Homo_sapiens 0 1070
ENST00000370481 GBP3-008 protein_coding Homo_sapiens 0 265
ENST00000370482 GBP3-009 retained_intron Homo_sapiens 0 265
ENST00000475853 GBP3-004 processed_transcript Homo_sapiens 0.0000000004 69
ENST00000489444 GBP3-005 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000493594 GBP3-003 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000564665 GBP3-010 protein_coding Homo_sapiens 0 198
ENST00000568006 GBP3-012 nonsense_mediated_decay Homo_sapiens 0.0000000004 69

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