ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182625 Sox12-002 ENSMUSG00000051817 10090 - 2:152393611-152398063 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000182625
Transcript ID C166 Tie2+ EC mES
ENSMUST00000182625 64.722±9.40 1.603±1.04 23.717±2.88

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000976 IDA transcription regulatory region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001105 IDA RNA polymerase II transcription coactivator activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0021510 IDA spinal cord development
GO:0032993 IDA protein-DNA complex
GO:0045165 IEA cell fate commitment
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0065004 IDA protein-DNA complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000112979 sox10-001 protein_coding Danio_rerio 0.0000005 62
ENST00000244745 SOX4-001 protein_coding Homo_sapiens 0 270
ENST00000250055 SOX15-001 protein_coding Homo_sapiens 2e-25 121
ENST00000342665 SOX12-001 protein_coding Homo_sapiens 0 2115
ENST00000538513 SOX15-002 protein_coding Homo_sapiens 2e-25 121
ENST00000570788 SOX15-003 protein_coding Homo_sapiens 2e-25 121

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