ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: tetratricopeptide repeat domain 21B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000243344 TTC21B-001 ENSG00000123607 9606 - 2:165873362-165953843 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000243344
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000243344 0.870±0.15 1.435±1.01 4.081±0.00 2.807±0.00 2.254±1.16

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005929 IEA cilium
GO:0006357 IMP regulation of transcription from RNA polymerase II promoter
GO:0007224 IEA smoothened signaling pathway
GO:0008589 IEA regulation of smoothened signaling pathway
GO:0021591 IEA ventricular system development
GO:0021798 IEA forebrain dorsal/ventral pattern formation
GO:0030991 IDA intraciliary transport particle A
GO:0035721 IEA intraciliary retrograde transport
GO:0035735 IEA intraciliary transport involved in cilium morphogenesis
GO:0060271 IEA cilium morphogenesis
GO:0061512 IMP protein localization to cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102718 Ttc21b-001 protein_coding Mus_musculus 0 3733
ENSMUST00000125446 Ttc21b-003 protein_coding Mus_musculus 0 3493
ENSMUST00000108492 Hif3a-002 protein_coding Mus_musculus 0.0001 55
ENSMUST00000146436 Accs-004 retained_intron Mus_musculus 0.0004 53

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