ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: phosphodiesterase 6B, cGMP-specific, rod, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000255622 PDE6B-001 ENSG00000133256 9606 + 4:625584-670782 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000255622
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000255622 0.056±0.00 0.121±0.00 0.030±0.01

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0007165 IEA signal transduction
GO:0007601 IEA visual perception
GO:0007603 TAS phototransduction, visible light
GO:0008152 IEA metabolic process
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0046037 IMP GMP metabolic process
GO:0046872 IEA metal ion binding
GO:0047555 IMP 3',5'-cyclic-GMP phosphodiesterase activity
GO:0051480 IMP cytosolic calcium ion homeostasis
GO:0097381 TAS photoreceptor disc membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031456 Pde6b-001 protein_coding Mus_musculus 0 2667
ENSMUST00000134865 Pde6b-002 retained_intron Mus_musculus 0 1437
ENSMUST00000025956 Pde6c-201 protein_coding Mus_musculus 0 324
ENSMUST00000112329 Pde6c-202 protein_coding Mus_musculus 0 215

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