ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: syntaxin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258301 STX6-001 ENSG00000135823 9606 - 1:180972725-181022911 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000258301
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000258301 5.803±3.90 13.682±2.76 9.661±0.00 11.136±5.12

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005484 IBA SNAP receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005769 IDA early endosome
GO:0005794 IDA Golgi apparatus
GO:0005802 IEA trans-Golgi network
GO:0005886 TAS plasma membrane
GO:0006886 IBA intracellular protein transport
GO:0006906 IPI vesicle fusion
GO:0007032 IEA endosome organization
GO:0016020 IEA membrane
GO:0016021 IBA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030136 TAS clathrin-coated vesicle
GO:0031201 IDA SNARE complex
GO:0032588 ISS trans-Golgi network membrane
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0048193 IEA Golgi vesicle transport
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027743 Stx6-001 protein_coding Mus_musculus 0 1051
ENSMUST00000195302 Stx6-003 protein_coding Mus_musculus 0 948
ENSMUST00000193059 Stx6-009 nonsense_mediated_decay Mus_musculus 0 828
ENSMUST00000195693 Stx6-005 retained_intron Mus_musculus 0 584
ENSMUST00000191769 Stx6-008 retained_intron Mus_musculus 0 472
ENSMUST00000192519 Stx6-010 processed_transcript Mus_musculus 0 470
ENSMUST00000192690 Stx6-002 protein_coding Mus_musculus 0 359
ENSMUST00000192311 Stx6-006 retained_intron Mus_musculus 0 292

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