ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: poly(A) binding protein, cytoplasmic 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000281589 PABPC3-001 ENSG00000151846 9606 + 13:25095868-25099254 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000281589
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000281589 0.478±0.16 0.653±0.17 0.040±0.00 0.619±0.00 0.137±0.31

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005737 NAS cytoplasm
GO:0008143 IDA poly(A) binding
GO:0016071 NAS mRNA metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001809 Pabpc1-001 protein_coding Mus_musculus 0 3068
ENSMUST00000192231 Gm8276-001 processed_pseudogene Mus_musculus 0 1810
ENSMUST00000063219 Pabpc2-001 protein_coding Mus_musculus 0 1415
ENSMUST00000162696 Gm16580-001 processed_pseudogene Mus_musculus 0 1229
ENSMUST00000156793 Pabpc1-006 processed_transcript Mus_musculus 0 965
ENSMUST00000057190 Pabpc6-201 protein_coding Mus_musculus 0 845
ENSMUST00000146327 Pabpc1-002 processed_transcript Mus_musculus 0 817
ENSMUST00000146577 Pabpc1-003 processed_transcript Mus_musculus 0 689
ENSMUST00000155116 Pabpc1-007 protein_coding Mus_musculus 0 464
ENSMUST00000142357 Pabpc1-005 processed_transcript Mus_musculus 0 398
ENSMUST00000147116 Pabpc1-004 processed_transcript Mus_musculus 0 398

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