ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: serine/arginine repetitive matrix 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000301740 SRRM2-001 ENSG00000167978 9606 + 16:2752329-2771412 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000301740
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000301740 15.559±0.00 31.744±19.38 23.111±0.00 33.151±0.00 37.522±26.01

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0005634 IDA nucleus
GO:0015030 IDA Cajal body
GO:0016607 IDA nuclear speck
GO:0044822 IDA poly(A) RNA binding
GO:0047485 IPI protein N-terminus binding
GO:0070742 IDA C2H2 zinc finger domain binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088621 Srrm2-001 protein_coding Mus_musculus 0 5033
ENSMUST00000190686 Srrm2-002 protein_coding Mus_musculus 0 5033
ENSMUST00000186914 Srrm2-004 processed_transcript Mus_musculus 0 2453
ENSMUST00000189977 Srrm2-003 retained_intron Mus_musculus 0 1519
ENSMUST00000186961 Srrm2-012 protein_coding Mus_musculus 0 809
ENSMUST00000160730 Gm16581-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000191385 Srrm2-006 protein_coding Mus_musculus 0 418
ENSMUST00000190293 Srrm2-007 retained_intron Mus_musculus 0 313
ENSMUST00000186259 Srrm2-009 nonsense_mediated_decay Mus_musculus 0 309

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