ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: cytochrome c, somatic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000305786 CYCS-001 ENSG00000172115 9606 - 7:25120091-25125361 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000305786
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000305786 12.663±1.05 11.377±3.05 8.398±0.00 13.118±0.00 14.280±15.78

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 TAS protein phosphatase type 2A complex
GO:0004722 TAS protein serine/threonine phosphatase activity
GO:0005506 IEA iron ion binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005739 IEA:IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005758 TAS mitochondrial intermembrane space
GO:0005829 IMP cytosol
GO:0006309 IMP apoptotic DNA fragmentation
GO:0006915 TAS apoptotic process
GO:0008635 TAS activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c
GO:0009055 IEA electron carrier activity
GO:0016311 TAS dephosphorylation
GO:0020037 IEA:TAS heme binding
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045155 IDA electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity
GO:0045333 TAS cellular respiration
GO:0055114 IEA oxidation-reduction process
GO:0070469 IEA respiratory chain
GO:0097193 TAS intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161401 Cycs-001 protein_coding Mus_musculus 0 628
ENSMUST00000073080 Gm10053-201 protein_coding Mus_musculus 0 580
ENSMUST00000077766 Cycs-002 retained_intron Mus_musculus 0 435
ENSMUST00000078246 Gm10108-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000118431 Gm13772-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000119355 Gm13252-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000120227 Gm14238-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000006 58
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00002 57

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