ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319170 RAPH1-001 ENSG00000173166 9606 - 2:203433682-203535410 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000319170
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000319170 2.384±0.00 7.615±3.82 2.848±0.00 5.174±0.00 3.553±2.48

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0031252 IEA cell leading edge
GO:0042995 IEA cell projection
GO:0048675 IEA axon extension

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140485 Raph1-001 protein_coding Mus_musculus 0 4564
ENSMUST00000027168 Raph1-201 protein_coding Mus_musculus 0 1439
ENSMUST00000090293 Raph1-003 protein_coding Mus_musculus 0 1439
ENSMUST00000142258 Raph1-004 protein_coding Mus_musculus 0 771
ENSMUST00000182085 Raph1-005 protein_coding Mus_musculus 0 713
ENSMUST00000188511 Raph1-002 retained_intron Mus_musculus 0 418
ENSMUST00000189383 Raph1-006 retained_intron Mus_musculus 0 200

Loading