ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: protocadherin 11 Y-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333703 PCDH11Y-002 ENSG00000099715 9606 + Y:5000226-5105444 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000333703
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000333703 0.174±0.00 0.009±0.00 0.019±0.00 0.028±0.00 0.047±0.04

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000193899 Pcdh11x-006 protein_coding Mus_musculus 0 3358
ENSMUST00000192677 Pcdh11x-007 protein_coding Mus_musculus 0 3236
ENSMUST00000195088 Pcdh11x-004 nonsense_mediated_decay Mus_musculus 0 3236
ENSMUST00000113358 Pcdh11x-001 protein_coding Mus_musculus 0 3236
ENSMUST00000113364 Pcdh11x-003 protein_coding Mus_musculus 0 3236
ENSMUST00000050239 Pcdh11x-201 protein_coding Mus_musculus 0 3201
ENSMUST00000192977 Pcdh11x-008 retained_intron Mus_musculus 0 243

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