ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: histocompatibility (minor) 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340852 HM13-011 ENSG00000101294 9606 + 20:31514428-31569567 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000340852
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000340852 88.127±0.00 109.143±43.21 94.060±0.00 83.573±40.30

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0005791 IDA rough endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0008233 IDA peptidase activity
GO:0009986 ISS cell surface
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0033619 IDA membrane protein proteolysis
GO:0042500 IMP aspartic endopeptidase activity, intramembrane cleaving
GO:0042803 IDA protein homodimerization activity
GO:0071458 IDA integral component of cytoplasmic side of endoplasmic reticulum membrane
GO:0071556 IDA integral component of lumenal side of endoplasmic reticulum membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125366 H13-001 protein_coding Mus_musculus 0 1779
ENSMUST00000089059 H13-002 protein_coding Mus_musculus 0 1554
ENSMUST00000079247 H13-003 protein_coding Mus_musculus 0 830
ENSMUST00000109825 H13-006 protein_coding Mus_musculus 0 747
ENSDART00000128433 hm13-001 protein_coding Danio_rerio 0 649
ENSMUST00000148156 H13-005 retained_intron Mus_musculus 0 625
ENSMUST00000129439 H13-004 retained_intron Mus_musculus 1e-34 152

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