ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein H3 (2H9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354695 HNRNPH3-003 ENSG00000096746 9606 + 10:68332122-68342272 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000354695
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000354695 35.854±11.24 33.449±16.86 29.319±0.00 31.060±14.39

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000398 NAS mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 NAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005681 NAS spliceosomal complex
GO:0006396 TAS RNA processing
GO:0008380 TAS RNA splicing
GO:0030855 IEP epithelial cell differentiation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118898 Hnrnph3-002 protein_coding Mus_musculus 0 1799
ENSMUST00000020263 Hnrnph3-001 protein_coding Mus_musculus 0 1066
ENSMUST00000140743 Hnrnph3-003 nonsense_mediated_decay Mus_musculus 0 1064
ENSMUST00000143689 Hnrnph3-005 retained_intron Mus_musculus 0 486
ENSMUST00000141616 Hnrnph3-006 retained_intron Mus_musculus 0 411
ENSDART00000057651 hnrnph3-201 protein_coding Danio_rerio 0 270
ENSDART00000113082 hnrnph3-001 protein_coding Danio_rerio 0 270
ENSMUST00000119814 Hnrnph3-004 protein_coding Mus_musculus 0 261
ENSMUST00000069304 Hnrnph1-201 protein_coding Mus_musculus 0 248
ENSMUST00000134230 Hnrnph1-009 processed_transcript Mus_musculus 0 248
ENSMUST00000077817 Hnrnph1-006 protein_coding Mus_musculus 0 248
ENSMUST00000127964 Hnrnph1-010 processed_transcript Mus_musculus 0 248
ENSMUST00000109142 Hnrnph1-005 protein_coding Mus_musculus 0 248
ENSDART00000059918 hnrnph1-001 protein_coding Danio_rerio 0 246
ENSDART00000015636 hnrnph1l-001 protein_coding Danio_rerio 0 237
ENSMUST00000133435 Hnrnph1-013 processed_transcript Mus_musculus 0 235
ENSMUST00000123371 Hnrnph1-008 processed_transcript Mus_musculus 0 195
ENSMUST00000126737 Hnrnph1-007 processed_transcript Mus_musculus 0 195
ENSMUST00000143594 Rufy2-002 nonsense_mediated_decay Mus_musculus 2e-40 171

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