ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: PHD finger protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393387 PHF3-201 ENSG00000118482 9606 + 6:63646526-63714509 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000393387
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000393387 0.428±0.00 3.399±2.05 0.859±0.00 6.244±0.00 3.232±2.22

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007275 NAS multicellular organismal development
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088310 Phf3-201 protein_coding Mus_musculus 0 4327
ENSMUST00000186733 Phf3-003 protein_coding Mus_musculus 0 4327
ENSMUST00000186105 Phf3-002 retained_intron Mus_musculus 0 1088
ENSMUST00000191329 Phf3-010 protein_coding Mus_musculus 0 1044
ENSMUST00000191245 Phf3-001 retained_intron Mus_musculus 0 929
ENSMUST00000191064 Phf3-006 nonsense_mediated_decay Mus_musculus 0 732
ENSMUST00000185521 Phf3-011 retained_intron Mus_musculus 0 523
ENSMUST00000188780 Phf3-007 protein_coding Mus_musculus 0 488
ENSMUST00000190190 Phf3-009 retained_intron Mus_musculus 0 372
ENSMUST00000187968 Phf3-012 protein_coding Mus_musculus 0 333
ENSMUST00000117483 Gm13378-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000188847 Phf3-004 retained_intron Mus_musculus 3e-40 172
ENSMUST00000187600 Phf3-008 processed_transcript Mus_musculus 1e-39 171

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