ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: matrin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394805 MATR3-002 ENSG00000015479 9606 + 5:139293648-139331359 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000394805
Transcript ID HAoEC HUVEC
ENST00000394805 13.537±0.29 10.975±4.35

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005637 TAS nuclear inner membrane
GO:0008219 IEA cell death
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166793 Matr3-001 protein_coding Mus_musculus 0 5618
ENSMUST00000187389 Matr3-008 protein_coding Mus_musculus 0 4529
ENSMUST00000190029 Matr3-007 protein_coding Mus_musculus 0 4242
ENSMUST00000190121 Matr3-002 protein_coding Mus_musculus 0 3398
ENSMUST00000190653 Matr3-003 protein_coding Mus_musculus 0 2521
ENSMUST00000186796 Matr3-005 protein_coding Mus_musculus 0 2510
ENSMUST00000188767 Matr3-004 nonsense_mediated_decay Mus_musculus 0 2507
ENSMUST00000188275 Matr3-006 protein_coding Mus_musculus 0 2438
ENSMUST00000186614 Matr3-010 protein_coding Mus_musculus 0 2285
ENSMUST00000187980 Matr3-016 retained_intron Mus_musculus 0 1740
ENSMUST00000188359 Matr3-015 protein_coding Mus_musculus 0 1075
ENSMUST00000187513 Gm28285-001 protein_coding Mus_musculus 0 736
ENSMUST00000160839 Matr3-ps2-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000189039 Matr3-013 protein_coding Mus_musculus 0 651
ENSMUST00000187793 Gm28285-004 protein_coding Mus_musculus 0 649
ENSMUST00000190458 Gm28285-005 protein_coding Mus_musculus 0 590
ENSMUST00000186292 Matr3-011 protein_coding Mus_musculus 0 582
ENSMUST00000187543 Matr3-009 protein_coding Mus_musculus 0 435
ENSMUST00000186158 Matr3-012 retained_intron Mus_musculus 0 261
ENSMUST00000189163 Gm28285-003 protein_coding Mus_musculus 0 243
ENSMUST00000190570 Gm28285-002 processed_transcript Mus_musculus 0 224
ENSMUST00000186295 Gm28285-006 processed_transcript Mus_musculus 0 191

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