ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: SP140 nuclear body protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396563 SP140L-202 ENSG00000185404 9606 + 2:230327270-230403730 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000396563
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000396563 3.052±0.00 1.926±0.34 3.701±0.00 3.134±0.00 0.502±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072767 Arhgef12-201 protein_coding Mus_musculus 0 396
ENSMUST00000165665 Arhgef12-202 protein_coding Mus_musculus 0 396
ENSMUST00000189121 Gm2427-001 unprocessed_pseudogene Mus_musculus 0 385
ENSMUST00000080204 Sp140-001 protein_coding Mus_musculus 0 383
ENSMUST00000160010 Gm7281-001 unprocessed_pseudogene Mus_musculus 0 368
ENSMUST00000162896 Gm6264-001 transcribed_unprocessed_pseudogene Mus_musculus 0 263
ENSMUST00000186987 Gm18342-001 unprocessed_pseudogene Mus_musculus 0 248
ENSMUST00000160119 Sp140-006 retained_intron Mus_musculus 9e-37 159
ENSMUST00000160487 Gm2389-001 unprocessed_pseudogene Mus_musculus 5e-24 117
ENSMUST00000161497 Sp140-004 protein_coding Mus_musculus 9e-22 110
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.000000006 68

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