ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: high mobility group box 3 pseudogene 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417997 HMGB3P20-001 ENSG00000226059 9606 - 7:26982768-26983367 processed_pseudogene

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECENST00000417997
Transcript ID HAoEC
ENST00000417997 0.017±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 678
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 678
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 678
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 678
ENSMUST00000078030 Gm6104-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 645
ENSMUST00000121238 Gm11805-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000120072 Gm5060-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000195316 Gm8850-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000123100 Hmgb3-005 protein_coding Mus_musculus 0 538
ENSMUST00000155930 Gm8813-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000117931 Gm12365-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000176139 Gm18367-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000117806 Gm15576-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000193850 Gm5979-001 unprocessed_pseudogene Mus_musculus 0 460
ENSMUST00000117771 Gm5752-001 processed_pseudogene Mus_musculus 0 427
ENSDART00000024750 hmgb3b-001 protein_coding Danio_rerio 3.00004e-41 172
ENSDART00000128242 hmgb3b-002 protein_coding Danio_rerio 4.00001e-40 169
ENSMUST00000117677 Gm13386-001 processed_pseudogene Mus_musculus 5e-29 132

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