ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: sodium channel, voltage-gated, type X, alpha subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449082 SCN10A-001 ENSG00000185313 9606 - 3:38696802-38794010 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000449082
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000449082 0.013±0.00 0.017±0.01 0.020±0.00 0.028±0.03

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001518 IDA:IEA voltage-gated sodium channel complex
GO:0002027 IMP regulation of heart rate
GO:0005216 IEA ion channel activity
GO:0005248 IDA:IEA voltage-gated sodium channel activity
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0006814 TAS:IEA sodium ion transport
GO:0007600 TAS sensory perception
GO:0016020 IEA membrane
GO:0019228 IBA neuronal action potential
GO:0019233 IEA sensory perception of pain
GO:0030424 IEA axon
GO:0034765 IDA regulation of ion transmembrane transport
GO:0035725 IDA sodium ion transmembrane transport
GO:0044299 IEA C-fiber
GO:0055085 IEA transmembrane transport
GO:0055117 IMP regulation of cardiac muscle contraction
GO:0060371 IMP regulation of atrial cardiac muscle cell membrane depolarization
GO:0061337 IEA cardiac conduction
GO:0070062 IDA extracellular vesicular exosome
GO:0086010 IBA membrane depolarization during action potential
GO:0086067 IMP AV node cell to bundle of His cell communication
GO:0086069 IMP bundle of His cell to Purkinje myocyte communication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084787 Scn10a-201 protein_coding Mus_musculus 0 5254
ENSMUST00000065196 Scn5a-201 protein_coding Mus_musculus 0 1607
ENSMUST00000120420 Scn5a-002 protein_coding Mus_musculus 0 1607
ENSMUST00000117911 Scn5a-001 protein_coding Mus_musculus 0 1607
ENSMUST00000021056 Scn4a-001 protein_coding Mus_musculus 0 1009
ENSMUST00000100067 Scn2a1-201 protein_coding Mus_musculus 0 784
ENSMUST00000028377 Scn2a1-001 protein_coding Mus_musculus 0 784
ENSMUST00000169900 Scn9a-203 protein_coding Mus_musculus 0 569
ENSMUST00000100063 Scn9a-201 protein_coding Mus_musculus 0 569
ENSMUST00000164384 Scn9a-202 protein_coding Mus_musculus 0 569
ENSMUST00000112354 Scn9a-002 protein_coding Mus_musculus 0 569
ENSMUST00000100064 Scn9a-001 protein_coding Mus_musculus 0 569
ENSDART00000044157 scn4ab-001 protein_coding Danio_rerio 0 381
ENSDART00000104004 scn4ab-201 protein_coding Danio_rerio 0 379

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