ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: RNA binding motif protein 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453310 RBM39-012 ENSG00000131051 9606 - 20:35734519-35742258 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; HUVECENST00000453310
Transcript ID HUVEC
ENST00000453310 10.313±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137566 Rbm39-009 nonsense_mediated_decay Mus_musculus 0 876
ENSMUST00000132929 Rbm39-007 retained_intron Mus_musculus 0 577
ENSMUST00000155837 Rbm39-002 nonsense_mediated_decay Mus_musculus 0 566
ENSMUST00000146549 Rbm39-008 nonsense_mediated_decay Mus_musculus 0 558
ENSMUST00000152919 Rbm39-005 nonsense_mediated_decay Mus_musculus 0 459
ENSMUST00000137340 Rbm39-004 retained_intron Mus_musculus 0 451
ENSMUST00000154677 Rbm39-024 nonsense_mediated_decay Mus_musculus 0 409
ENSMUST00000109584 Rbm39-022 protein_coding Mus_musculus 0 396
ENSMUST00000128243 Rbm39-012 retained_intron Mus_musculus 0 361
ENSMUST00000109587 Rbm39-001 protein_coding Mus_musculus 0 361
ENSMUST00000153514 Rbm39-025 nonsense_mediated_decay Mus_musculus 0 359
ENSMUST00000146288 Rbm39-021 protein_coding Mus_musculus 0 340
ENSMUST00000029149 Rbm39-018 protein_coding Mus_musculus 0 340
ENSMUST00000142071 Rbm39-026 nonsense_mediated_decay Mus_musculus 0 322
ENSMUST00000147098 Rbm39-013 nonsense_mediated_decay Mus_musculus 0 318
ENSMUST00000126992 Rbm39-020 protein_coding Mus_musculus 0 309
ENSMUST00000119414 Gm15575-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000146297 Rbm39-003 protein_coding Mus_musculus 2e-19 100
ENSMUST00000120746 Ncald-002 protein_coding Mus_musculus 0.0002 53
ENSMUST00000119730 Ncald-003 protein_coding Mus_musculus 0.0002 53
ENSMUST00000132423 Ncald-011 processed_transcript Mus_musculus 0.00004 53

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