ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: sodium channel, voltage-gated, type V, alpha subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455624 SCN5A-002 ENSG00000183873 9606 - 3:38549128-38633332 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HUVECENST00000455624
Transcript ID HUVEC
ENST00000455624 0.231±0.08

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001518 IEA voltage-gated sodium channel complex
GO:0005216 IEA ion channel activity
GO:0005248 IEA voltage-gated sodium channel activity
GO:0006811 IEA ion transport
GO:0006814 IEA sodium ion transport
GO:0016020 IEA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117911 Scn5a-001 protein_coding Mus_musculus 0 5930
ENSMUST00000120420 Scn5a-002 protein_coding Mus_musculus 0 5794
ENSMUST00000065196 Scn5a-201 protein_coding Mus_musculus 0 5786
ENSMUST00000084787 Scn10a-201 protein_coding Mus_musculus 0 809
ENSMUST00000021056 Scn4a-001 protein_coding Mus_musculus 0 771
ENSMUST00000100067 Scn2a1-201 protein_coding Mus_musculus 0 564
ENSMUST00000028377 Scn2a1-001 protein_coding Mus_musculus 0 564
ENSMUST00000066432 Scn3a-201 protein_coding Mus_musculus 0 564
ENSMUST00000100069 Scn3a-001 protein_coding Mus_musculus 0 564
ENSMUST00000169900 Scn9a-203 protein_coding Mus_musculus 0 531
ENSMUST00000100063 Scn9a-201 protein_coding Mus_musculus 0 531
ENSMUST00000164384 Scn9a-202 protein_coding Mus_musculus 0 531
ENSMUST00000112354 Scn9a-002 protein_coding Mus_musculus 0 531
ENSMUST00000100064 Scn9a-001 protein_coding Mus_musculus 0 531
ENSMUST00000112371 Scn1a-201 protein_coding Mus_musculus 0 483
ENSMUST00000094951 Scn1a-005 protein_coding Mus_musculus 0 483
ENSMUST00000077489 Scn1a-004 protein_coding Mus_musculus 0 483
ENSMUST00000156865 Scn1a-003 protein_coding Mus_musculus 0 483
ENSMUST00000112366 Scn1a-001 protein_coding Mus_musculus 0 483
ENSDART00000022761 scn8ab-201 protein_coding Danio_rerio 0 399
ENSDART00000151299 scn8ab-001 protein_coding Danio_rerio 0 399
ENSMUST00000126837 Scn3a-002 protein_coding Mus_musculus 0 318
ENSMUST00000144254 Scn2a1-004 protein_coding Mus_musculus 0 217
ENSMUST00000138368 Scn2a1-003 retained_intron Mus_musculus 4.06377e-44 185
ENSMUST00000138934 Scn5a-003 protein_coding Mus_musculus 4e-39 169

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