ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: homeobox B3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470495 HOXB3-001 ENSG00000120093 9606 - 17:48548870-48553922 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000470495
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000470495 1.315±1.15 4.437±0.00 6.990±3.93

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000979 IEA RNA polymerase II core promoter sequence-specific DNA binding
GO:0001525 IEP angiogenesis
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0009952 IEA anterior/posterior pattern specification
GO:0021546 IEA rhombomere development
GO:0021615 IEA glossopharyngeal nerve morphogenesis
GO:0030878 IEA thyroid gland development
GO:0048704 IEA embryonic skeletal system morphogenesis
GO:0050767 IEA regulation of neurogenesis
GO:0051216 IEA cartilage development
GO:0060216 IEA definitive hemopoiesis
GO:0060324 IEA face development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093944 Hoxb3-002 protein_coding Mus_musculus 0 2771
ENSMUST00000055334 Hoxb3-001 protein_coding Mus_musculus 0 2082
ENSMUST00000123091 Hoxb3-003 protein_coding Mus_musculus 0 268
ENSMUST00000053932 Gm28230-001 nonsense_mediated_decay Mus_musculus 0 268
ENSMUST00000190553 Hoxd3-008 retained_intron Mus_musculus 0 268
ENSMUST00000140666 Hoxd3-007 protein_coding Mus_musculus 0 268
ENSMUST00000047830 Hoxd3-005 protein_coding Mus_musculus 0 268
ENSMUST00000111982 Hoxd3-004 protein_coding Mus_musculus 0 268
ENSMUST00000111983 Hoxd3-001 protein_coding Mus_musculus 0 268
ENSMUST00000123805 Hoxb1-002 processed_transcript Mus_musculus 0.0000000000001 84
ENSMUST00000019117 Hoxb1-001 protein_coding Mus_musculus 0.0000000000001 84

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