ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: Rho guanine nucleotide exchange factor (GEF) 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475323 ARHGEF39-003 ENSG00000137135 9606 - 9:35658877-35665192 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000475323
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000475323 7.638±0.00 2.655±0.66 5.202±0.00 1.420±0.00 1.470±0.50

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005886 IDA plasma membrane
GO:0030335 IDA positive regulation of cell migration
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146781 Arhgef39-005 processed_transcript Mus_musculus 0 545
ENSMUST00000125834 Arhgef39-004 processed_transcript Mus_musculus 0 545
ENSMUST00000054538 Arhgef39-001 protein_coding Mus_musculus 0 545
ENSMUST00000147124 Arhgef39-007 processed_transcript Mus_musculus 0 324
ENSMUST00000154905 Arhgef39-006 processed_transcript Mus_musculus 0 324
ENSMUST00000136005 Arhgef39-010 protein_coding Mus_musculus 0 324
ENSMUST00000128754 Arhgef39-002 processed_transcript Mus_musculus 0 324

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