ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: transcription factor A, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487519 TFAM-002 ENSG00000108064 9606 + 10:58385022-58399221 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000487519
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000487519 2.151±0.00 4.971±2.26 1.200±0.00 6.260±0.00 3.022±1.78

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006261 TAS DNA-dependent DNA replication
GO:0006356 TAS regulation of transcription from RNA polymerase I promoter
GO:0006390 IMP transcription from mitochondrial promoter
GO:0006391 IDA transcription initiation from mitochondrial promoter
GO:0008301 IDA DNA binding, bending
GO:0010467 TAS gene expression
GO:0031072 IEA heat shock protein binding
GO:0033108 IEA mitochondrial respiratory chain complex assembly
GO:0042645 IDA mitochondrial nucleoid
GO:0044822 IDA poly(A) RNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0070363 IDA mitochondrial light strand promoter sense binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092430 Tfam-001 protein_coding Mus_musculus 0 318
ENSMUST00000121685 Tfam-004 protein_coding Mus_musculus 0 300
ENSMUST00000105432 Tfam-002 protein_coding Mus_musculus 0 300
ENSMUST00000152505 Tfam-005 protein_coding Mus_musculus 0 222
ENSMUST00000145220 Tfam-003 processed_transcript Mus_musculus 0 209
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.000002 60

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