ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: crooked neck pre-mRNA splicing factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490910 CRNKL1-003 ENSG00000101343 9606 - 20:20034368-20056046 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000245 IDA spliceosomal complex assembly
GO:0000398 IC mRNA splicing, via spliceosome
GO:0003723 IDA RNA binding
GO:0005515 IPI protein binding
GO:0005681 IDA spliceosomal complex
GO:0005737 IEA cytoplasm
GO:0044822 IDA poly(A) RNA binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001818 Crnkl1-001 protein_coding Mus_musculus 0 2553
ENSMUST00000096093 RP24-301O17.3-001 processed_pseudogene Mus_musculus 0 2015
ENSMUST00000096092 RP24-301O17.1-001 processed_pseudogene Mus_musculus 0 1982
ENSMUST00000164674 Gm4782-201 protein_coding Mus_musculus 0 1982
ENSMUST00000168705 Gm8038-201 processed_pseudogene Mus_musculus 0 1977
ENSDART00000112689 crnkl1-201 protein_coding Danio_rerio 0 948

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