ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: matrin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502499 MATR3-010 ENSG00000015479 9606 + 5:139293722-139330405 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000502499
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000502499 23.661±0.00 27.771±5.38 39.336±0.00 65.807±0.00 38.986±20.88

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190121 Matr3-002 protein_coding Mus_musculus 0 3518
ENSMUST00000166793 Matr3-001 protein_coding Mus_musculus 0 3398
ENSMUST00000187389 Matr3-008 protein_coding Mus_musculus 0 2523
ENSMUST00000190653 Matr3-003 protein_coding Mus_musculus 0 2403
ENSMUST00000186796 Matr3-005 protein_coding Mus_musculus 0 2392
ENSMUST00000188767 Matr3-004 nonsense_mediated_decay Mus_musculus 0 2388
ENSMUST00000188275 Matr3-006 protein_coding Mus_musculus 0 2320
ENSMUST00000190029 Matr3-007 protein_coding Mus_musculus 0 2235
ENSMUST00000187793 Gm28285-004 protein_coding Mus_musculus 0 531
ENSMUST00000160839 Matr3-ps2-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000186614 Matr3-010 protein_coding Mus_musculus 0 283
ENSMUST00000186158 Matr3-012 retained_intron Mus_musculus 0 263
ENSMUST00000189039 Matr3-013 protein_coding Mus_musculus 0 226
ENSMUST00000189163 Gm28285-003 protein_coding Mus_musculus 3e-27 128

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