ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: matrin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504045 MATR3-011 ENSG00000015479 9606 + 5:139293718-139317713 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000504045
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000504045 40.488±9.36 77.442±0.00 38.359±15.84

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187389 Matr3-008 protein_coding Mus_musculus 0 2499
ENSMUST00000190029 Matr3-007 protein_coding Mus_musculus 0 2497
ENSMUST00000166793 Matr3-001 protein_coding Mus_musculus 0 2497
ENSMUST00000186614 Matr3-010 protein_coding Mus_musculus 0 2285
ENSMUST00000187980 Matr3-016 retained_intron Mus_musculus 0 1740
ENSMUST00000188359 Matr3-015 protein_coding Mus_musculus 0 1158
ENSMUST00000187513 Gm28285-001 protein_coding Mus_musculus 0 736
ENSMUST00000189039 Matr3-013 protein_coding Mus_musculus 0 651
ENSMUST00000160839 Matr3-ps2-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000188275 Matr3-006 protein_coding Mus_musculus 0 610
ENSMUST00000186796 Matr3-005 protein_coding Mus_musculus 0 610
ENSMUST00000190653 Matr3-003 protein_coding Mus_musculus 0 610
ENSMUST00000187793 Gm28285-004 protein_coding Mus_musculus 0 610
ENSMUST00000190458 Gm28285-005 protein_coding Mus_musculus 0 590
ENSMUST00000186292 Matr3-011 protein_coding Mus_musculus 0 582
ENSMUST00000188767 Matr3-004 nonsense_mediated_decay Mus_musculus 0 564
ENSMUST00000190121 Matr3-002 protein_coding Mus_musculus 0 492
ENSMUST00000187543 Matr3-009 protein_coding Mus_musculus 0 435
ENSMUST00000186158 Matr3-012 retained_intron Mus_musculus 0 261
ENSMUST00000189163 Gm28285-003 protein_coding Mus_musculus 0 243
ENSMUST00000190570 Gm28285-002 processed_transcript Mus_musculus 0 224
ENSMUST00000186295 Gm28285-006 processed_transcript Mus_musculus 0 191

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