ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: actinin, alpha 3 (gene/pseudogene)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513398 ACTN3-001 ENSG00000248746 9606 + 11:66546841-66563329 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000513398
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000513398 0.063±0.00 0.059±0.04 0.044±0.00 0.055±0.05

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005178 TAS integrin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0005884 TAS actin filament
GO:0005925 IMP focal adhesion
GO:0008307 TAS structural constituent of muscle
GO:0030049 TAS muscle filament sliding
GO:0031143 TAS pseudopodium
GO:0042803 TAS protein homodimerization activity
GO:0042981 NAS regulation of apoptotic process
GO:0048041 IMP focal adhesion assembly
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006626 Actn3-001 protein_coding Mus_musculus 0 3426
ENSDART00000005682 actn3a-001 protein_coding Danio_rerio 0 1613
ENSMUST00000168193 Actn2-201 protein_coding Mus_musculus 0 1578
ENSMUST00000064204 Actn2-001 protein_coding Mus_musculus 0 1578
ENSMUST00000167327 Actn1-202 protein_coding Mus_musculus 0 1546
ENSMUST00000021554 Actn1-201 protein_coding Mus_musculus 0 1450
ENSMUST00000068045 Actn4-001 protein_coding Mus_musculus 0 1419
ENSDART00000100217 actn1-201 protein_coding Danio_rerio 0 1134
ENSDART00000133740 actn1-002 nonsense_mediated_decay Danio_rerio 0 1134
ENSDART00000140243 actn1-001 protein_coding Danio_rerio 0 1134
ENSMUST00000138811 Actn3-002 processed_transcript Mus_musculus 0 1112
ENSMUST00000127210 Actn4-005 protein_coding Mus_musculus 0 1053
ENSMUST00000144909 Actn4-002 processed_transcript Mus_musculus 0 789
ENSMUST00000110616 Actn2-002 protein_coding Mus_musculus 0 390
ENSMUST00000150493 Actn4-006 processed_transcript Mus_musculus 0 385
ENSMUST00000195384 Gm6101-001 processed_pseudogene Mus_musculus 9e-28 130

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