ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: protocadherin gamma subfamily B, 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519479 PCDHGB4-001 ENSG00000253953 9606 + 5:141387885-141512979 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HUVECENST00000519479
Transcript ID HUVEC
ENST00000519479 13.945±1.90

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 TAS cell adhesion
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 NAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016339 NAS calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000195363 Pcdhgb4-001 protein_coding Mus_musculus 0 3055
ENSMUST00000192535 Pcdhgb5-001 protein_coding Mus_musculus 0 2590
ENSMUST00000195069 Pcdhgb4-002 processed_transcript Mus_musculus 0 1934
ENSMUST00000003599 Pcdhgb6-001 protein_coding Mus_musculus 0 1921
ENSMUST00000193006 Pcdhgb5-002 retained_intron Mus_musculus 0 1530
ENSMUST00000195823 Pcdhga6-001 protein_coding Mus_musculus 0 1133
ENSMUST00000193869 Pcdhga2-001 protein_coding Mus_musculus 0 1133
ENSMUST00000044851 Pcdhga12-001 protein_coding Mus_musculus 0 1133
ENSMUST00000194190 Pcdhga1-001 protein_coding Mus_musculus 0 1131
ENSMUST00000073447 Pcdhga3-001 protein_coding Mus_musculus 0 1131
ENSMUST00000193414 Pcdhga5-001 protein_coding Mus_musculus 0 1131
ENSMUST00000061279 Pcdhga11-001 protein_coding Mus_musculus 0 1131
ENSMUST00000055935 Pcdhgc5-001 protein_coding Mus_musculus 0 1129
ENSMUST00000192511 Pcdhga7-001 protein_coding Mus_musculus 0 1129
ENSMUST00000194418 Pcdhga4-001 protein_coding Mus_musculus 0 1129
ENSMUST00000192931 Pcdhgb1-001 protein_coding Mus_musculus 0 1129
ENSMUST00000192103 Pcdhgc3-003 nonsense_mediated_decay Mus_musculus 0 1129
ENSMUST00000076807 Pcdhgc3-001 protein_coding Mus_musculus 0 1129
ENSMUST00000194928 Pcdhgb7-001 protein_coding Mus_musculus 0 1129
ENSMUST00000195764 Pcdhgb8-001 polymorphic_pseudogene Mus_musculus 0 1129
ENSMUST00000195112 Pcdhgb2-001 protein_coding Mus_musculus 0 1127
ENSMUST00000195239 Pcdhga8-003 protein_coding Mus_musculus 0 1127
ENSMUST00000066140 Pcdhga8-001 protein_coding Mus_musculus 0 1127
ENSMUST00000066149 Pcdhga8-001 protein_coding Mus_musculus 0 1125
ENSMUST00000091935 Pcdhga9-001 protein_coding Mus_musculus 0 1123
ENSMUST00000193404 Pcdhga10-001 protein_coding Mus_musculus 0 1123
ENSMUST00000195624 Pcdhgb1-002 processed_transcript Mus_musculus 0 819
ENSMUST00000193631 Pcdhgb2-002 retained_intron Mus_musculus 0 778
ENSMUST00000115661 Pcdha4-001 protein_coding Mus_musculus 0 571
ENSMUST00000193941 Pcdhgc5-003 protein_coding Mus_musculus 0 569
ENSMUST00000192875 Pcdhgc5-002 retained_intron Mus_musculus 0 553
ENSMUST00000193890 Pcdhgc5-004 protein_coding Mus_musculus 0 414

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