| Transcript ID | HAoEC | HMVEC-D | HUVEC |
|---|---|---|---|
| ENST00000522557 | 0.242±0.11 | 0.473±0.00 | 0.140±0.09 |
ANGIOGENES: A knowledge database for angiogenesis
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Transcript Info |
||||||
| Description: | high mobility group box 1 pseudogene 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000522557  |
HMGB1P1-001 |
ENSG00000124097 |
9606 | - |
20:57488392-57489027  |
processed_pseudogene |
Expression Patterns
|
Conserved Regions |
|---|
| Not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000118415
|
Hmgb1-ps3-001 | processed_pseudogene | Mus_musculus | 0 | 815 |
|
ENSMUST00000117548
|
Hmgb1-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 800 |
|
ENSMUST00000118281
|
Hmgb1-ps4-001 | processed_pseudogene | Mus_musculus | 0 | 797 |
|
ENSMUST00000119715
|
Gm5937-001 | processed_pseudogene | Mus_musculus | 0 | 793 |
|
ENSMUST00000120421
|
Gm15387-001 | processed_pseudogene | Mus_musculus | 0 | 791 |
|
ENSMUST00000178049
|
Gm21596-201 | processed_pseudogene | Mus_musculus | 0 | 791 |
|
ENSMUST00000093196
|
Hmgb1-002 | protein_coding | Mus_musculus | 0 | 785 |
|
ENSMUST00000110505
|
Hmgb1-003 | protein_coding | Mus_musculus | 0 | 785 |
|
ENSMUST00000085546
|
Hmgb1-001 | protein_coding | Mus_musculus | 0 | 785 |
|
ENSMUST00000179821
|
Gm5527-001 | processed_pseudogene | Mus_musculus | 0 | 782 |
|
ENSMUST00000084171
|
Gm5518-201 | processed_pseudogene | Mus_musculus | 0 | 776 |
|
ENSMUST00000192809
|
Gm37164-001 | processed_pseudogene | Mus_musculus | 0 | 773 |
|
ENSMUST00000179479
|
Hmgb1-ps9-201 | processed_pseudogene | Mus_musculus | 0 | 765 |
|
ENSMUST00000173370
|
Hmgb1-ps7-001 | processed_pseudogene | Mus_musculus | 0 | 763 |
|
ENSMUST00000195073
|
Gm5842-001 | processed_pseudogene | Mus_musculus | 0 | 750 |
|
ENSMUST00000120637
|
Gm13121-001 | processed_pseudogene | Mus_musculus | 0 | 745 |
|
ENSMUST00000119350
|
Hmgb1-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 736 |
|
ENSMUST00000119503
|
Hmgb1-ps6-001 | processed_pseudogene | Mus_musculus | 0 | 730 |
|
ENSMUST00000179326
|
Gm5473-201 | processed_pseudogene | Mus_musculus | 0 | 715 |
|
ENSMUST00000119927
|
Gm12331-001 | processed_pseudogene | Mus_musculus | 0 | 713 |
|
ENSMUST00000176164
|
Gm3307-001 | processed_pseudogene | Mus_musculus | 0 | 706 |
|
ENSMUST00000181542
|
Hmgb1-ps8-001 | processed_pseudogene | Mus_musculus | 0 | 702 |
|
ENSMUST00000117362
|
Gm12568-001 | processed_pseudogene | Mus_musculus | 0 | 699 |
|
ENSMUST00000121058
|
Hmgb1-ps5-001 | processed_pseudogene | Mus_musculus | 0 | 684 |
|
ENSMUST00000120873
|
Gm13932-001 | processed_pseudogene | Mus_musculus | 0 | 675 |
|
ENSMUST00000119126
|
Gm9078-001 | processed_pseudogene | Mus_musculus | 0 | 673 |
|
ENSMUST00000120842
|
Gm8152-001 | processed_pseudogene | Mus_musculus | 0 | 665 |
|
ENSMUST00000180890
|
Gm26585-001 | processed_pseudogene | Mus_musculus | 0 | 664 |
|
ENSMUST00000118053
|
Gm13379-001 | processed_pseudogene | Mus_musculus | 0 | 664 |
|
ENSMUST00000117940
|
Hmgb1-rs18-001 | processed_pseudogene | Mus_musculus | 0 | 652 |
|
ENSMUST00000073196
|
Gm2710-001 | processed_pseudogene | Mus_musculus | 0 | 647 |
|
ENSMUST00000121589
|
Gm11645-001 | processed_pseudogene | Mus_musculus | 0 | 645 |
|
ENSMUST00000162030
|
Gm10075-001 | processed_pseudogene | Mus_musculus | 0 | 645 |
|
ENSMUST00000117107
|
Gm15560-001 | processed_pseudogene | Mus_musculus | 0 | 643 |
|
ENSMUST00000120015
|
Gm6461-001 | processed_pseudogene | Mus_musculus | 0 | 623 |
|
ENSMUST00000190177
|
Gm7858-001 | processed_pseudogene | Mus_musculus | 0 | 621 |
|
ENSMUST00000121009
|
Gm14049-001 | processed_pseudogene | Mus_musculus | 0 | 616 |
|
ENSMUST00000139443
|
Hmgb1-006 | protein_coding | Mus_musculus | 0 | 612 |
|
ENSMUST00000120175
|
Gm11830-001 | processed_pseudogene | Mus_musculus | 0 | 595 |
|
ENSMUST00000122269
|
Gm14473-001 | processed_pseudogene | Mus_musculus | 0 | 584 |
|
ENSMUST00000117499
|
Gm12261-001 | processed_pseudogene | Mus_musculus | 0 | 582 |
|
ENSMUST00000121222
|
Gm5396-001 | processed_pseudogene | Mus_musculus | 0 | 571 |
|
ENSMUST00000179328
|
Gm8807-201 | processed_pseudogene | Mus_musculus | 0 | 568 |
|
ENSMUST00000183926
|
Gm27254-001 | processed_pseudogene | Mus_musculus | 0 | 542 |
|
ENSMUST00000120970
|
Gm15750-001 | processed_pseudogene | Mus_musculus | 0 | 529 |
|
ENSMUST00000119766
|
Gm12118-001 | processed_pseudogene | Mus_musculus | 0 | 527 |
|
ENSMUST00000182688
|
Gm7909-001 | processed_pseudogene | Mus_musculus | 0 | 525 |
|
ENSMUST00000138553
|
Hmgb1-007 | protein_coding | Mus_musculus | 0 | 508 |
|
ENSMUST00000186576
|
Gm29124-001 | processed_pseudogene | Mus_musculus | 0 | 431 |
|
ENSMUST00000133667
|
Hmgb1-004 | retained_intron | Mus_musculus | 0 | 414 |
|
ENSMUST00000155086
|
Hmgb1-009 | retained_intron | Mus_musculus | 0 | 399 |
|
ENSMUST00000125605
|
Hmgb1-008 | protein_coding | Mus_musculus | 0 | 377 |
|
ENSMUST00000120168
|
Gm13902-001 | processed_pseudogene | Mus_musculus | 0 | 363 |
|
ENSMUST00000168653
|
Gm3851-001 | processed_pseudogene | Mus_musculus | 0 | 355 |
|
ENSMUST00000116383
|
Gm14448-001 | processed_pseudogene | Mus_musculus | 0 | 244 |
|
ENSMUST00000128343
|
Gm3160-001 | processed_pseudogene | Mus_musculus | 5e-19 | 99 |
