ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560658 TRPM1-005 ENSG00000134160 9606 - 15:31060235-31101706 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHUVECENST00000560658
Transcript ID BECs HUVEC
ENST00000560658 0.276±0.00 0.036±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005262 IDA calcium channel activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0007216 IMP G-protein coupled glutamate receptor signaling pathway
GO:0007601 IMP visual perception
GO:0034220 TAS ion transmembrane transport
GO:0055085 TAS transmembrane transport
GO:0060402 IDA calcium ion transport into cytosol
GO:0070588 TAS calcium ion transmembrane transport
GO:0071482 IMP cellular response to light stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177102 Trpm1-201 protein_coding Mus_musculus 0 1070
ENSMUST00000032737 Trpm1-008 protein_coding Mus_musculus 0 1070
ENSMUST00000107519 Trpm1-005 protein_coding Mus_musculus 0 1070
ENSMUST00000107516 Trpm1-007 retained_intron Mus_musculus 0 1070
ENSMUST00000141574 Trpm1-006 retained_intron Mus_musculus 0 1070
ENSMUST00000107525 Trpm1-001 protein_coding Mus_musculus 0 1061
ENSMUST00000153421 Trpm1-002 nonsense_mediated_decay Mus_musculus 0 1061
ENSMUST00000085222 Trpm1-003 protein_coding Mus_musculus 0 1061
ENSMUST00000107515 Trpm1-009 protein_coding Mus_musculus 0 798
ENSMUST00000176392 Trpm1-018 processed_transcript Mus_musculus 0 331

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