ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: syntaxin 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569638 STX1B-002 ENSG00000099365 9606 - 16:30989258-31000955 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000569638
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000569638 0.036±0.01 0.182±0.19 0.086±0.00 0.282±0.00 0.050±0.04

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0005484 IEA SNAP receptor activity
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106267 Stx1b-001 protein_coding Mus_musculus 0 1059
ENSDART00000081951 stx1b-001 protein_coding Danio_rerio 0 542
ENSMUST00000005509 Stx1a-001 protein_coding Mus_musculus 0 492
ENSMUST00000156135 Stx1b-002 retained_intron Mus_musculus 0 460
ENSMUST00000133812 Stx1a-005 processed_transcript Mus_musculus 0 342
ENSMUST00000144198 Stx1a-004 processed_transcript Mus_musculus 0 340
ENSMUST00000150838 Stx1a-003 nonsense_mediated_decay Mus_musculus 0 340
ENSMUST00000156626 Stx1a-002 retained_intron Mus_musculus 0 340

Loading