ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: proteasome (prosome, macropain) subunit, beta type, 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000571309 PSMB6-003 ENSG00000142507 9606 + 17:4796204-4798329 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000571309
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000571309 60.800±0.00 34.523±8.94 37.682±0.00 24.775±5.61

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005839 IEA proteasome core complex
GO:0051603 IEA proteolysis involved in cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018430 Psmb6-001 protein_coding Mus_musculus 0 418
ENSMUST00000187074 Psmb6-ps2-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000117520 Psmb6-ps-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000128870 Psmb6-002 retained_intron Mus_musculus 0 287
ENSMUST00000148535 Psmb6-003 retained_intron Mus_musculus 6.99949e-42 174
ENSMUST00000145503 Psmb6-004 retained_intron Mus_musculus 3.00004e-41 172

Loading