ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: synaptopodin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610556 SYNPO2-202 ENSG00000172403 9606 + 4:118850688-119061245 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHUVECENST00000610556
Transcript ID HAoEC HHSEC HUVEC
ENST00000610556 0.012±0.00 0.118±0.00 0.018±0.01

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005634 ISS nucleus
GO:0005925 IDA focal adhesion
GO:0015629 IDA actin cytoskeleton
GO:0030018 ISS Z disc
GO:0051371 ISS muscle alpha-actinin binding
GO:0071889 ISS 14-3-3 protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106426 Synpo2-005 protein_coding Mus_musculus 0 3070
ENSMUST00000051443 Synpo2-007 protein_coding Mus_musculus 0 2684
ENSMUST00000106427 Synpo2-004 protein_coding Mus_musculus 0 2519
ENSMUST00000184590 Synpo2-006 protein_coding Mus_musculus 0 547
ENSMUST00000139160 Synpo2-003 protein_coding Mus_musculus 2e-27 130
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00001 58
ENSMUST00000021864 Ssr1-201 protein_coding Mus_musculus 0.0001 55

Loading