ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621442 POLR2A-201 ENSG00000181222 9606 + 17:7484379-7514618 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000621442
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000621442 9.509±7.33 32.746±16.10 2.984±0.00 4.990±0.00 16.593±12.18

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 TAS mRNA splicing, via spliceosome
GO:0000974 IDA Prp19 complex
GO:0001055 IBA RNA polymerase II activity
GO:0001172 IEA transcription, RNA-templated
GO:0003677 NAS:IEA DNA binding
GO:0003899 NAS:IEA DNA-directed RNA polymerase activity
GO:0003968 IEA RNA-directed RNA polymerase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005665 IDA:IEA DNA-directed RNA polymerase II, core complex
GO:0006281 TAS DNA repair
GO:0006283 TAS transcription-coupled nucleotide-excision repair
GO:0006289 TAS nucleotide-excision repair
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0006366 NAS:IEA transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0006370 TAS 7-methylguanosine mRNA capping
GO:0008380 TAS RNA splicing
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0031625 IPI ubiquitin protein ligase binding
GO:0033120 IDA positive regulation of RNA splicing
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0050434 TAS positive regulation of viral transcription

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058470 Polr2a-001 protein_coding Mus_musculus 0 7915
ENSMUST00000071213 Polr2a-201 protein_coding Mus_musculus 0 5858
ENSMUST00000151586 Polr2a-003 processed_transcript Mus_musculus 0 436
ENSMUST00000156588 Polr2a-002 processed_transcript Mus_musculus 0 239

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