ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000075014 sqstm1 7955 + 14:16460339-16465752 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000113012 sqstm1-201 16460386-16465746 protein_coding
  ENSDART00000134366 sqstm1-004 16464363-16465581 retained_intron
  ENSDART00000140061 sqstm1-001 16460339-16465752 protein_coding
  ENSDART00000141840 sqstm1-003 16463518-16464614 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; LECsUnknown1Unknown2ENSDART00000113012ENSDART00000134366ENSDART00000140061
Transcript ID LECs Unknown1 Unknown2
ENSDART00000113012 3.605±2.40 11.258±0.00 12.824±0.00
ENSDART00000134366 4.165±0.00 N/A N/A
ENSDART00000140061 2.288±0.00 16.740±0.00 16.639±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000XE CIL_0000XE_0001 CGP
CIL_0000XF CIL_0000XF_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000161011 SQSTM1 sequestosome 1 protein_coding Homo_sapiens
ENSMUSG00000015837 Sqstm1 protein_coding Mus_musculus

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