ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: stromal cell derived factor 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000078808 SDF4 9606 - 1:1216908-1232031 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263741 SDF4-007 1216931-1232031 protein_coding
  ENST00000360001 SDF4-001 1216908-1232001 protein_coding
  ENST00000403997 SDF4-006 1218523-1228596 protein_coding
  ENST00000459994 SDF4-005 1227272-1231968 processed_transcript
  ENST00000465727 SDF4-002 1216931-1232031 nonsense_mediated_decay
  ENST00000478938 SDF4-004 1216934-1220293 retained_intron
  ENST00000494748 SDF4-003 1216932-1221351 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000263741ENST00000360001ENST00000403997ENST00000478938ENST00000494748
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000263741 N/A N/A N/A N/A 0.247±0.00
ENST00000360001 390.842±29.78 79.827±33.92 58.182±0.00 94.797±0.00 101.712±77.78
ENST00000403997 N/A 58.376±12.35 N/A N/A N/A
ENST00000478938 N/A N/A 15.757±0.00 N/A N/A
ENST00000494748 N/A N/A N/A N/A 3.920±3.68

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 ISS:IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005770 ISS late endosome
GO:0005794 IDA Golgi apparatus
GO:0005796 ISS Golgi lumen
GO:0005886 ISS plasma membrane
GO:0009650 ISS UV protection
GO:0016020 IDA membrane
GO:0017156 ISS calcium ion-dependent exocytosis
GO:0021549 ISS cerebellum development
GO:0042802 ISS identical protein binding
GO:0042995 IEA cell projection
GO:0045444 ISS fat cell differentiation
GO:0045471 ISS response to ethanol
GO:0070062 IDA extracellular vesicular exosome
GO:0070625 ISS zymogen granule exocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070682 sdf4 protein_coding Danio_rerio
ENSMUSG00000029076 Sdf4 protein_coding Mus_musculus

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