ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: nucleolin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115053 NCL 9606 - 2:231453531-231483641 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322723 NCL-001 231453531-231464594 protein_coding
  ENST00000356936 NCL-015 231455442-231458357 protein_coding
  ENST00000417652 NCL-011 231461607-231464199 protein_coding
  ENST00000436894 NCL-013 231461681-231463693 protein_coding
  ENST00000453992 NCL-012 231461651-231464180 protein_coding
  ENST00000454824 NCL-010 231461594-231464207 protein_coding
  ENST00000461347 NCL-002 231454908-231483641 retained_intron
  ENST00000466274 NCL-016 231456010-231457410 retained_intron
  ENST00000484328 NCL-009 231462992-231464379 retained_intron
  ENST00000494618 NCL-014 231457426-231460725 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000322723ENST00000356936ENST00000417652ENST00000461347ENST00000494618
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000322723 38.270±19.04 114.125±46.16 13.075±0.00 86.846±0.00 43.255±43.00
ENST00000356936 125.789±77.12 150.790±44.00 N/A 111.928±0.00 72.537±19.12
ENST00000417652 N/A N/A N/A N/A 131.757±174.63
ENST00000461347 N/A N/A N/A N/A 1.396±0.41
ENST00000494618 N/A N/A N/A 127.099±0.00 85.029±13.25

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000899 CIL_000899_0001 VISTA
CIL_0007WD CIL_0007WD_0001 VISTA
CIL_0004KZ CIL_0004KZ_0002 CGP
CIL_00076N CIL_00076N_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001525 IDA angiogenesis
GO:0003676 IEA nucleic acid binding
GO:0003723 IDA RNA binding
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IEA nucleoplasm
GO:0005730 IDA nucleolus
GO:0005938 IDA cell cortex
GO:0008022 IPI protein C-terminus binding
GO:0016020 IDA membrane
GO:0030529 IDA ribonucleoprotein complex
GO:0036464 IDA cytoplasmic ribonucleoprotein granule
GO:0042162 IDA telomeric DNA binding
GO:0042802 IPI identical protein binding
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome
GO:1901838 IMP positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002710 ncl protein_coding Danio_rerio
ENSMUSG00000026234 Ncl protein_coding Mus_musculus

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