ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026234 Ncl 10090 - 1:86344719-86359400 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027438 Ncl-001 86344719-86359400 protein_coding
  ENSMUST00000185676 Ncl-002 86350495-86359364 retained_intron
  ENSMUST00000185785 Ncl-003 86357312-86358969 protein_coding
  ENSMUST00000186050 Ncl-005 86350564-86352063 retained_intron
  ENSMUST00000188682 Ncl-006 86350496-86351211 retained_intron
  ENSMUST00000189504 Ncl-004 86351101-86352306 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000027438ENSMUST00000185676ENSMUST00000188682
Transcript ID C166 Tie2+ EC mES
ENSMUST00000027438 14.528±1.73 11.978±4.33 29.198±0.00
ENSMUST00000185676 108.605±12.41 61.203±37.03 259.533±0.00
ENSMUST00000188682 N/A 197.702±148.69 561.783±63.75

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000899 CIL_000899_0002 VISTA
CIL_0007WD CIL_0007WD_0002 VISTA
CIL_0004KZ CIL_0004KZ_0003 CGP
CIL_00076N CIL_00076N_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001525 IEA angiogenesis
GO:0003723 ISS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0005938 IEA cell cortex
GO:0008022 IEA protein C-terminus binding
GO:0016020 IEA membrane
GO:0030529 ISS ribonucleoprotein complex
GO:0036464 IEA cytoplasmic ribonucleoprotein granule
GO:0042162 ISS telomeric DNA binding
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome
GO:1901838 IEA positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002710 ncl protein_coding Danio_rerio
ENSG00000115053 NCL nucleolin protein_coding Homo_sapiens

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