ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: retinoblastoma binding protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319715 RBBP6-001 ENSG00000122257 9606 + 16:24540195-24572863 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHMVEC-DHUVECENST00000319715
Transcript ID HAoEC HHSEC HMVEC-D HUVEC
ENST00000319715 4.019±1.87 3.066±0.00 4.422±0.00 4.332±2.69

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0003676 IEA nucleic acid binding
GO:0004842 IDA:IEA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA:IDA nucleus
GO:0005694 IEA chromosome
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0035264 IEA multicellular organism growth
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0048568 IEA embryonic organ development
GO:0061053 IEA somite development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052135 Rbbp6-001 protein_coding Mus_musculus 0 6785
ENSMUST00000071590 Rbbp6-002 protein_coding Mus_musculus 0 3419
ENSMUST00000098062 Rbbp6-005 protein_coding Mus_musculus 0 734
ENSMUST00000116315 Gm14385-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000126053 Rbbp6-009 retained_intron Mus_musculus 0 575
ENSMUST00000156738 Rbbp6-008 retained_intron Mus_musculus 0 420
ENSMUST00000137860 Rbbp6-007 retained_intron Mus_musculus 1.99965e-42 180

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