| Transcript ID | BECs | HAoEC | HHSEC | HMVEC-D | HUVEC |
|---|---|---|---|---|---|
| ENST00000276201 | 0.861±0.00 | 0.205±0.00 | 1.261±0.00 | N/A | 0.847±0.25 |
| ENST00000345865 | 2.451±0.78 | 1.877±0.96 | 4.102±0.00 | 3.098±0.00 | 3.463±1.65 |
| ENST00000619445 | N/A | N/A | N/A | 3.121±0.00 | 0.463±0.00 |
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | UPF3 regulator of nonsense transcripts homolog B (yeast) | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
|
ENSG00000125351 |
UPF3B | 9606 | - |
X:119834022-119852998 |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000276201 |
UPF3B-001 | 119834022-119852998 | protein_coding | ||
| ENST00000345865 |
UPF3B-002 | 119834026-119852998 | protein_coding | ||
| ENST00000478840 |
UPF3B-003 | 119838266-119845254 | processed_transcript | ||
| ENST00000619445 |
UPF3B-201 | 119834482-119852971 | protein_coding | ||
Expression Patterns
|
Conserved Regions | ||
|---|---|---|
| Region ID | Sub-Region | Region Type |
| CIL_000175 | CIL_000175_0002 | CGP |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0000184 | NAS | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
| GO:0000398 | TAS | mRNA splicing, via spliceosome |
| GO:0003729 | IDA | mRNA binding |
| GO:0005487 | NAS | nucleocytoplasmic transporter activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005654 | TAS | nucleoplasm |
| GO:0005737 | IDA | cytoplasm |
| GO:0005829 | TAS | cytosol |
| GO:0006366 | TAS | transcription from RNA polymerase II promoter |
| GO:0006369 | TAS | termination of RNA polymerase II transcription |
| GO:0006406 | TAS | mRNA export from nucleus |
| GO:0008380 | TAS | RNA splicing |
| GO:0010467 | TAS | gene expression |
| GO:0016070 | TAS | RNA metabolic process |
| GO:0016071 | TAS | mRNA metabolic process |
| GO:0031124 | TAS | mRNA 3'-end processing |
| GO:0035145 | IDA | exon-exon junction complex |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0045727 | IDA | positive regulation of translation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000000489
|
upf3b | protein_coding | Danio_rerio | ||
|
ENSMUSG00000036572
|
Upf3b | protein_coding | Mus_musculus | ||