ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036572 Upf3b 10090 - X:37091678-37110322 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076265 Upf3b-001 37091678-37110322 protein_coding
  ENSMUST00000130324 Upf3b-003 37095676-37104523 protein_coding
  ENSMUST00000133481 Upf3b-002 37097450-37110322 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000076265ENSMUST00000133481
Transcript ID C166 Tie2+ EC mES
ENSMUST00000076265 5.084±1.02 5.108±1.23 10.767±0.90
ENSMUST00000133481 0.739±0.05 0.977±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000175 CIL_000175_0003 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 IEA mRNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0035145 IEA exon-exon junction complex
GO:0044822 IEA poly(A) RNA binding
GO:0045727 IEA positive regulation of translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000489 upf3b protein_coding Danio_rerio
ENSG00000125351 UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast) protein_coding Homo_sapiens

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