ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: debranching RNA lariats 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260803 DBR1-001 ENSG00000138231 9606 - 3:138161012-138174949 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000260803
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000260803 0.744±0.00 4.195±0.83 6.339±0.00 3.600±1.78

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000375 IMP RNA splicing, via transesterification reactions
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0005634 IDA nucleus
GO:0006397 IEA mRNA processing
GO:0008419 IMP RNA lariat debranching enzyme activity
GO:0016787 IEA hydrolase activity
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0090502 IMP RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066650 Dbr1-001 protein_coding Mus_musculus 0 1515
ENSMUST00000148987 Dbr1-002 protein_coding Mus_musculus 0 654
ENSMUST00000156035 Dbr1-003 protein_coding Mus_musculus 0 470
ENSMUST00000138002 Dbr1-004 protein_coding Mus_musculus 0 361
ENSMUST00000136884 Dbr1-006 protein_coding Mus_musculus 0 270

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