ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: Zic family member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152977 ZIC1 9606 + 3:147393422-147510293 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000282928 ZIC1-001 147409384-147416719 protein_coding
  ENST00000472523 ZIC1-003 147393422-147507986 processed_transcript
  ENST00000474034 ZIC1-004 147421327-147510293 processed_transcript
  ENST00000481840 ZIC1-006 147507941-147509905 processed_transcript
  ENST00000488404 ZIC1-002 147393895-147413680 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHUVECENST00000282928ENST00000472523ENST00000474034ENST00000488404
Transcript ID BECs HAoEC HUVEC
ENST00000282928 0.009±0.00 0.037±0.02 0.024±0.00
ENST00000472523 0.413±0.00 0.206±0.00 0.048±0.02
ENST00000474034 N/A N/A 0.033±0.00
ENST00000488404 N/A 0.249±0.23 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007JF CIL_0007JF_0001 UCNEbase
CIL_00092K CIL_00092K_0001 VISTA
CIL_00092J CIL_00092J_0001 VISTA
CIL_0008O7 CIL_0008O7_0001 VISTA
CIL_0009D8 CIL_0009D8_0001 VISTA
CIL_0009BL CIL_0009BL_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007389 ISS pattern specification process
GO:0007417 IEA central nervous system development
GO:0007420 IDA brain development
GO:0007628 IEA adult walking behavior
GO:0008589 ISS regulation of smoothened signaling pathway
GO:0021510 IEA spinal cord development
GO:0030154 IEA cell differentiation
GO:0042307 ISS positive regulation of protein import into nucleus
GO:0042472 ISS inner ear morphogenesis
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015567 zic1 protein_coding Danio_rerio
ENSMUSG00000032368 Zic1 protein_coding Mus_musculus

Loading