ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032368 Zic1 10090 - 9:91358058-91365810 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034927 Zic1-001 91358058-91365768 protein_coding
  ENSMUST00000065360 Zic1-002 91360500-91365810 protein_coding
  ENSMUST00000173121 Zic1-003 91361581-91363054 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000034927ENSMUST00000065360ENSMUST00000173121
Transcript ID C166 Tie2+ EC mES
ENSMUST00000034927 0.267±0.09 0.543±0.50 0.015±0.00
ENSMUST00000065360 1.293±0.16 4.034±0.34 0.014±0.01
ENSMUST00000173121 N/A N/A 0.320±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007JF CIL_0007JF_0002 UCNEbase
CIL_0009BL CIL_0009BL_0002 VISTA
CIL_0009D8 CIL_0009D8_0002 VISTA
CIL_0008O7 CIL_0008O7_0002 VISTA
CIL_00092J CIL_00092J_0002 VISTA
CIL_00092K CIL_00092K_0002 VISTA
CIL_000589 CIL_000589_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001501 NAS skeletal system development
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007389 IDA pattern specification process
GO:0007417 IGI central nervous system development
GO:0007420 IDA brain development
GO:0007628 IMP adult walking behavior
GO:0008589 IPI regulation of smoothened signaling pathway
GO:0021510 IMP spinal cord development
GO:0030154 IEA cell differentiation
GO:0042307 IDA positive regulation of protein import into nucleus
GO:0042472 ISS inner ear morphogenesis
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015567 zic1 protein_coding Danio_rerio
ENSG00000152977 ZIC1 Zic family member 1 protein_coding Homo_sapiens

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