ANGIOGENES

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
ENST00000520242	TCEB1-001	ENSG00000154582	9606	-	8:73945617-73972247	protein_coding

Expression Patterns

Transcript ID	BECs	HAoEC	HHSEC	HMVEC-D	HUVEC
ENST00000520242	10.520±2.43	6.022±1.16	5.150±0.00	9.173±0.00	14.384±9.01

Conserved Regions
Not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005515	IPI	protein binding
GO:0005654	TAS	nucleoplasm
GO:0005829	TAS	cytosol
GO:0006357	TAS	regulation of transcription from RNA polymerase II promoter
GO:0006366	TAS	transcription from RNA polymerase II promoter
GO:0006368	TAS	transcription elongation from RNA polymerase II promoter
GO:0006511	IEA	ubiquitin-dependent protein catabolic process
GO:0010467	TAS	gene expression
GO:0016032	TAS	viral process
GO:0050434	TAS	positive regulation of viral transcription
GO:0061418	TAS	regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0071456	TAS	cellular response to hypoxia

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000188641	Tceb1-002	protein_coding	Mus_musculus	0	1029
ENSMUST00000115352	Tceb1-001	protein_coding	Mus_musculus	0	911
ENSMUST00000186948	Tceb1-004	protein_coding	Mus_musculus	0	680
ENSMUST00000185771	Tceb1-006	protein_coding	Mus_musculus	0	671
ENSMUST00000187910	Tceb1-005	protein_coding	Mus_musculus	0	638
ENSMUST00000185393	Tceb1-009	protein_coding	Mus_musculus	0	429
ENSMUST00000119040	Gm14517-001	processed_pseudogene	Mus_musculus	0	331
ENSMUST00000117761	Gm11386-001	processed_pseudogene	Mus_musculus	0	303
ENSMUST00000186701	Tceb1-007	protein_coding	Mus_musculus	0	250
ENSMUST00000134558	Gm16265-001	processed_pseudogene	Mus_musculus	2e-32	145

Loading