ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505105 RCHY1-003 ENSG00000163743 9606 - 4:75482008-75514312 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000505105
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000505105 2.812±0.00 5.060±2.05 8.949±0.00 9.504±0.00 5.737±2.22

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0002039 IPI p53 binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008270 IEA:IDA zinc ion binding
GO:0016567 IDA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0032436 IDA positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0042803 IPI protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0051865 IDA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031345 Rchy1-001 protein_coding Mus_musculus 0 691
ENSMUST00000140670 Rchy1-002 processed_transcript Mus_musculus 0 595
ENSMUST00000169948 Rchy1-004 protein_coding Mus_musculus 0 444
ENSMUST00000138351 Rchy1-003 retained_intron Mus_musculus 0 198

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